CDS
| Accession Number | TCMCG057C26527 |
| gbkey | CDS |
| Protein Id | XP_018485803.1 |
| Location | join(29121090..29121184,29121315..29121412,29121506..29121673,29121828..29121901,29121998..29122484,29122571..29122645,29122735..29122854,29122920..29122948) |
| Gene | LOC108856491 |
| GeneID | 108856491 |
| Organism | Raphanus sativus |
Protein
| Length | 381aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018630301.1 |
| Definition | PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 1-like isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction |
R00597
[VIEW IN KEGG] |
| KEGG_rclass |
RC00003
[VIEW IN KEGG] RC00334 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15429
[VIEW IN KEGG] |
| EC |
2.1.1.228
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005829 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTTGGATGAAAGCAACTTTGATGTCAATTTGAAGCTGTGGGCTATTCGGATTCCCCGTGAACTCTGTAAAAGCGCAACTAAGATACTCAATGGATACATGCTCAACATGCCTCGGATTAAACCCATCACGGAAGAATCCGGTTTTGAAAAGACTCGTTTGGTGTTACTGTCGGAAACTGTTAAAAGTGCCGATTTGTCGGAGATACCAGATGAAAAACTAAACCAGCTTAAGAAACTAAGTGAAGTTGAAGTAGTTCCTCACTCGGTCACCCTTGGCTATTCCTATTGGAGTGCAGATCACATATTGAAGCAGATTCTGCCAGATGGAGTGGATATACCTTCATCTTTTGAAACCATAGGTCATATAGCCCACTTAAATCTACACGACGAGCTCCTTCCCTTCAAAGACGTGATAGCAAAAGTTATCTATGATAAAAATTATCCAAGGATCAAGACAATTGTGAACAAAGTCGGAACCATCTCCAACGAGTTTCGAGTGCCAAAGTTCGAAGTGTTAGCCGGAGAAAGTGGGATGGAAACAGAAGTAAAGCAATACGGGGCAAGGTTTAAGCTGGACTACAGCCTTGTATACTGGAACTCGAGACTGGAGCATGAGCACATGCGTCTTACCTCTCTGTTTAAACCTGGAGAAACCGTGTGTGATATGTTTGCTGGCATTGGTCCTTTTGCTATTCCAGCTGCACAGAAGGGATGCTTCGTTTACGCAAATGATTTGAATCCGGATAGTGTTCGGTACTTGAAGATCAATGCGGAGTTCAACAAGGTTGATGAGTTGATCTGTGTGCACAATATGGATGCTAGAAAATTTATTTCTCAGTTGATGAAGGTCTCAGATGGTGAGGGTAACTTGCATTCGGTTGCTGATGACAAAACTAAGGAAGCAGTGGCAAGTCAAGAAGAAGATACAAACGCTGGAATTAGCAGAGAGCCTAGTGGTGGTGCGATTAAGAAGCCATCTGGTAGTTCAGAGACAGAGAATGTAGAAGGAAACGCAAAGAAGAGGTTGAAACAAACGGTGCTTCCAATAGCAAAGCCGTGGGAACATGTCGACCATGTTATTATGAACCTTCCAGCTTCTGCCTTGCAGTTTCTCGTCTTGTGTTCTTTCAAGGCATTCACGTAA |
| Protein: MLDESNFDVNLKLWAIRIPRELCKSATKILNGYMLNMPRIKPITEESGFEKTRLVLLSETVKSADLSEIPDEKLNQLKKLSEVEVVPHSVTLGYSYWSADHILKQILPDGVDIPSSFETIGHIAHLNLHDELLPFKDVIAKVIYDKNYPRIKTIVNKVGTISNEFRVPKFEVLAGESGMETEVKQYGARFKLDYSLVYWNSRLEHEHMRLTSLFKPGETVCDMFAGIGPFAIPAAQKGCFVYANDLNPDSVRYLKINAEFNKVDELICVHNMDARKFISQLMKVSDGEGNLHSVADDKTKEAVASQEEDTNAGISREPSGGAIKKPSGSSETENVEGNAKKRLKQTVLPIAKPWEHVDHVIMNLPASALQFLVLCSFKAFT |